PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30131.m006850
Common NameLOC8260765, RCOM_1441350
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family WRKY
Protein Properties Length: 172aa    MW: 18921.1 Da    PI: 5.6522
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30131.m006850genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY22.62.1e-0749753359
                   --EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY 33 pvkkkversaedpkvveitYegeHnhe 59
                   +vk +v+rs ed+++++ tYegeHnh+
  30131.m006850 49 SVKEEVQRSIEDQTILVATYEGEHNHP 75
                   6999**********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.3E-64777IPR003657WRKY domain
SuperFamilySSF1182904.71E-54877IPR003657WRKY domain
PROSITE profilePS508119.8215077IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MDYSSSWVDT SLDLNLNPRR VKDDVPIQER LAMANDVQSN FMELGRNISV KEEVQRSIED  60
QTILVATYEG EHNHPHPSQM EATSGASRSL TLGSVPCSAS LGSSGPTITL DLTKSKSSND  120
ARSSKPRMET PEVRQFLVEQ MASSLTKDPN FTAALAAAIS GKMLQQNHKD KW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002512719.11e-126PREDICTED: probable WRKY transcription factor 40
SwissprotQ9SAH73e-40WRK40_ARATH; Probable WRKY transcription factor 40
TrEMBLB9RGL01e-126B9RGL0_RICCO; Putative uncharacterized protein
STRINGPOPTR_0003s18060.11e-66(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-41WRKY DNA-binding protein 40